DNA is the legacy code of earth-resident life, evolved over billions of years of development, made with rarely refactored cut and paste parts, rife with abandoned features, and possessing an epic lack of documentation.
But it works. https://t.co/HMGbsvlQ1k
— Grady Booch (@Grady_Booch) December 26, 2020
mRNA therapeutics in two leading coronavirus vaccines
by David Cox / 02 Dec 2020
“In 1995, Katalin Karikó was at her lowest ebb. A biochemist at the University of Pennsylvania (UPenn), Karikó had dedicated much of the previous two decades to finding a way to turn one of the most fundamental building blocks of life, mRNA, into a whole new category of therapeutics.
More often than not, Karikó found herself hitting dead ends. Numerous grant applications were rejected, and an attempt to raise funding from venture capitalists in New York to form a spin-off company had proved to be a fruitless endeavour. ”They initially promised to give us money, but then they never returned my phone calls,” she says. By the mid 1990s, Karikó’s bosses at UPenn had run out of patience. Frustrated with the lack of funding she was generating for her research, they offered the scientist a bleak choice: leave or be demoted. It was a demeaning prospect for someone who had once been on the path to a full professorship. For Karikó’s dreams of using mRNA to create new vaccines and drugs for many chronic illnesses, it seemed to be the end of the road.
"Katalin Kariko and Drew Weissman are now favourites to win the Nobel Prize for Medicine. Kariko has a senior post at German research firm BioNTech, after years on the fringes of her profession." 👏https://t.co/kHPHpSkcxZ
— JC Punongbayan (@jcpunongbayan) December 24, 2020
Thirty four years earlier, the discovery of mRNA had been announced amidst a clamour of scientific excitement in the summer of 1961. For more than a decade, researchers in the US and Europe had been attempting to unravel exactly how DNA is involved in the creation of proteins – the long strings of amino acids that are vital to the growth and functioning of all life forms. It transpired that mRNA was the answer. These molecules act like digital tape recorders, repeatedly copying instructions from DNA in the cell nucleus, and carrying them to protein-making structures called ribosomes. Without this key role, DNA would be nothing but a useless string of chemicals, and so some have dubbed mRNA the ‘software of life.’
Preparing a blog post on the BioNTech/Pfizer vaccine & compared the live SARS-CoV-2 spike protein to the one in the mRNA vaccine. And indeed as described, it only differs by two amino-acids. The two Proline substitutions that make the vaccine work (KV -> PP, with the !!): 1/3 pic.twitter.com/9yBcpctwXM
— Bert Hubert (@PowerDNS_Bert) December 24, 2020
At the time the nine scientists credited with discovering mRNA were purely interested in solving a basic biological mystery, but by the 1970s the scientific world had begun to wonder if it could exploit this cellular messaging system to turn our bodies into medicine-making factories. Artificial mRNA, designed and created in a petri dish and then delivered to the cells of sick patients through tiny packages called nanoparticles, offered a way of instructing the body to heal itself. Research groups around the world began looking into whether mRNA could be used to create the vaccines of the future by delivering messages to cells, teaching them to create specific antibodies to fight off a viral infection. Others started investigating whether mRNA could help the immune system recognise and destroy cancerous tissue.
Karikó was first exposed to these ideas as an undergraduate student in 1976, during a lecture at the University of Szeged in her native Hungary. Intrigued, she began a PhD, studying how mRNA might be used to target viruses. While the concept of gene therapy was also beginning to take off at the same time, capturing the imagination of many scientists, she felt mRNA had the potential to help many more people. “I always thought that the majority of patients don’t actually need new genes, they need something temporary like a drug, to cure their aches and pains,” she said. “So mRNA was always more interesting to me.” At the time, the technology required to make such grand ambitions a reality did not yet exist. While scientists knew how to isolate mRNA from cells, creating artificial forms was not possible. But in 1984, the American biochemist Kary Mullis invented polymerase chain reaction (PCR), a method of amplifying very small amounts of DNA so it can be studied in detail.
PCR test is not diagnostic, Kary Mullis designer of PCR discussed its vast limitations for diagnosis, the amplification needs to be transparent & standard.
– If Mullis was alive today there would be no #pandemic.
– PCR is just a process.. it does not tell you that you are sick. pic.twitter.com/EyQiBgdKBY
— Graviola Finland (@GraviolaDOTfi) December 18, 2020
By 1989, other researchers had found a way to utilise PCR to generate mRNA from scratch, by amplifying DNA strands and using an enzyme called RNA polymerase to create mRNA molecules from these strands. “For scientists working on mRNA, this was very empowering,” said Karikó. “Suddenly we felt like we could do anything.” With an mRNA boom taking place on the other side of the Atlantic, Karikó decided it was time to leave Hungary and head for the US. So in 1985, she accepted a job at Temple University and moved to Philadelphia along with her husband, two year old daughter, and a teddy bear with £900 sewn into it – the proceeds from the sale of their car on the black market. It did not take long for the American dream to sour. After four years, she was forced to leave Temple University for neighbouring UPenn after a dispute with her boss, who then attempted to have her deported.
“The spike protein for the coronavirus. (University of Texas at Austin)”
There she began working on mRNA therapies which could be used to improve blood vessel transplants, by producing proteins to keep the newly transplanted vessels alive. However, by the early to mid 1990s, some of the early excitement surrounding mRNA was beginning to fade. While scientists had cracked the problem of how to create their own mRNA, a new hurdle had emerged. When they injected it into animals it induced such a severe inflammatory response from the immune system that they died immediately. Any thoughts of human trials were impossible.
This was a serious problem, but one Karikó was determined to solve. She recalls spending one Christmas and New Year’s Eve conducting experiments and writing grant applications. But many other scientists were turning away from the field, and her bosses at UPenn felt mRNA had shown itself to be impractical and she was wasting her time. They issued an ultimatum, if she wanted to continue working with mRNA she would lose her prestigious faculty position, and face a substantial pay cut. ”It was particularly horrible as that same week, I had just been diagnosed with cancer,” said Karikó. “I was facing two operations, and my husband, who had gone back to Hungary to pick up his green card, had got stranded there because of some visa issue, meaning he couldn’t come back for six months. I was really struggling, and then they told me this.” While undergoing surgery, Karikó assessed her options. She decided to stay, accept the humiliation of being demoted, and continue to doggedly pursue the problem.
Drs. Drew Weissman & Katalin Karikó—whose mRNA discovery at @PennMedicine helped pave the way for #COVID19 vaccines—received their first dose of the @pfizer/@BioNTech_Group shot together. They say, “The benefit is huge & there’s little to no risk.” https://t.co/Lg36CgMZMR pic.twitter.com/m64aoYTr3v
— Penn Medicine (@PennMedicine) December 23, 2020
This led to a chance meeting which would both change the course of her career, and that of science. In 1997, Drew Weissman, a respected immunologist, moved to UPenn. This was long before the days where scientific publications were available online, and so the only way for scientists to peruse the latest research was to photocopy it from journals. “I found myself fighting over a photocopy machine in the department with this scientist called Katalin Karikó,” he remembered. ”So we started talking, and comparing what each other did.” While Karikó’s academic status at UPenn remained lowly, Weissman had the funding to finance her experiments, and the two began a partnership. “This gave me optimism, and kept me going,” she said. “My salary was lower than the technician who worked next to me, but Drew was supportive and that’s what I concentrated on, not the roadblocks I’d had to face.”
While receiving the vaccine I reflected on my long journey by remembering my colleagues @barnathanes and @drdavidlanger who were so enthusiastic about the mRNA therapeutic use in my early days at Penn. Thank you! https://t.co/SheAX796q7
— Katalin Kariko (@kkariko) December 23, 2020
Karikó and Weissman realised that the key to creating a form of mRNA which could be administered safely, was to identify which of the underlying nucleosides – the letters of RNA’s genetic code – were provoking the immune system and replace them with something else. In the early 2000s, Karikó happened across a study which showed that one of these letters, Uridine, could trigger certain immune receptors. It was the crucial piece of information she had been searching for. In 2005, Karikó and Weissman published a study announcing a specifically modified form of mRNA, which replaced Uridine with an analog – a molecule which looked the same, but did not induce an immune response. It was a clever biological trick, and one which worked. When mice were injected with this modified mRNA, they lived. “I just remember Drew saying, ’Oh my god, it’s not immunogenic,’” said Karikó. “We realised at that moment that this would be very important, and it could be used in vaccines and therapies. So we published a paper, filed a patent, established a company, and then found there was no interest. Nobody invited us anywhere to talk about it, nothing.”
Unbeknown to them, however, some scientists were paying attention. Derrick Rossi, then a postdoctoral researcher at Stanford University, read Karikó and Weissman’s paper and was immediately intrigued. In 2010, Rossi co-founded a biotech company called Moderna, with a group of Harvard and MIT professors, with the specific aim of using modified mRNA to create vaccines and therapeutics. A decade on, Moderna is now one of the leaders in the Covid-19 vaccine race and valued at approximately $35 billion (£26b), after reporting that its mRNA based vaccine showed 94 per cent efficacy in a Phase III clinical trial. But it was not novel infectious disease vaccines which got the world interested in mRNA again. Around the same time, Rossi was establishing Moderna, Karikó and Weissman were also finally managing to commercialise their finding, licensing their technology to a small German company called BioNTech, after five years of trying and failing.
Moderna CEO: “No one has a factory sitting idle able to make 1 or 2 billion doses a year … None of us were ready because no mRNA vaccines have been approved before, but now we are building the infrastructure to make a billion doses.” https://t.co/dramySDIKL
— MIT Technology Review (@techreview) December 26, 2020
Both Moderna and BioNTech – which had been founded by a Turkish born entrepreneur called Ugur Sahin – had their eye on the lucrative fields of cancer immunotherapy, cardiovascular and metabolic diseases. Now that Karikó and Weissman’s discovery made it possible to safely administer mRNA to patients, some of the original goals for mRNA back in the 1970s, had become viable possibilities again. Vaccines were also on the horizon. In 2017, Moderna began developing a potential Zika virus vaccine, while in 2018 BioNTech entered into a partnership with Pfizer to develop mRNA vaccines for influenza, although the large scale funding which drives vaccine projects was still nowhere to be seen.
That has all changed in 2020. With the Covid-19 pandemic requiring vaccine development on an unprecedented scale, mRNA vaccine approaches held a clear advantage over the more traditional but time consuming method of using a dead or inactivated form of the virus to create an immune response. In April, Moderna received $483 million (£360m) from the US Biomedical Advanced Research and Development Authority to fasttrack its Covid-19 vaccine program. Karikó has been at the helm of BioNTech’s Covid-19 vaccine development. In 2013, she accepted an offer to become Senior Vice President at BioNTech after UPenn refused to reinstate her to the faculty position she had been demoted from in 1995. “They told me that they’d had a meeting and concluded that I was not of faculty quality,” she said. ”When I told them I was leaving, they laughed at me and said, ‘BioNTech doesn’t even have a website.’”
BioNTech/Pfizer & Moderna vaccine both use revolutionary approach applicable to any future vaccines. Sequence a virus & type harmless part into mRNA, doctored so not immuno-rejected. mRNA does the rest for you. Potentially works for any virus you likehttps://t.co/4YXi7b5m4b
— Richard Dawkins (@RichardDawkins) December 26, 2020
Now, BioNTech is a household name, following reports last month that the mRNA Covid-19 vaccine it has co-developed with Pfizer works with more than 95 per cent efficacy. Along with Moderna, it is set to supply billions of doses around the globe by the end of 2021. For Karikó, seeing the results of BioNTech’s Phase III trial, simply brought a sense of quiet satisfaction. “I didn’t jump or scream,” she said. “I expected that it would be very effective.” But after so many years of adversity, and struggling to convince people that her research was worthwhile, she is still trying to comprehend the fact that her breakthrough in mRNA technology could now change the lives of billions around the world, and help end the global pandemic. “I always wanted to help people, to try and get something into the clinic,” she said. “That was the motivation for me, and I was always optimistic. But to help that many people, I never imagined that. It makes me very happy to know that I’ve played a part in this success story.”
The New York Post published this interview with me Yesterdayhttps://t.co/EvgIssNiZe
— Katalin Kariko (@kkariko) December 6, 2020
One of the fastest developed vaccines ever, 30 years in the making
by Bojan Pancevski / Dec. 2, 2020
“The story of the first Covid-19 vaccine to be authorized in the West began 30 years ago in rural Germany when two young physicians, the children of Turkish migrants and freshly in love, pledged to invent a new treatment for cancer. It has taken 10 months for Germany’s BioNTech and its U.S. partner, Pfizer, to develop the vaccine that was granted emergency-use authorization in the U.K. on Wednesday—beating the previous Western record for a vaccine by more than three years. Yet, for BioNTech’s founders, Ugur Sahin and Özlem Türeci, the husband-and-wife team behind the successful endeavor, it was the outcome of three decades of work, starting long before the coronavirus first appeared in humans last winter. When the pandemic broke out, Dr. Sahin had spent years studying mRNA, genetic instructions that can be delivered into the body to help it defend itself against viruses and other threats. In January, days before the illness was first diagnosed in Europe, he used this knowledge to design a version of the vaccine on his home computer.
BioNTech co-founder Dr #UgurSahin designed the #COVIDー19 vaccine in just a few hours in mid-January, according to The Journal, a podcast from Gimlet and The Wall Street Journal.https://t.co/4TBkjCVwlX
— GreatGameIndia (@GreatGameIndia) December 27, 2020
“The success of Ugur and Özlem is a fantastic combination of two people who complement each other,” said Rolf Zinkernagel, a Swiss Nobel Prize laureate who once employed Dr. Sahin in his Zurich lab. “He is an innovative scientist, and she is an amazing clinician with a great sense for running a business.” Dr. Sahin was born in Iskenderun on Turkey’s Mediterranean coast in 1965. He moved to Germany four years later when his father was recruited to work at a Ford factory near Cologne as part of a policy to rebuild postwar Germany with foreign labor. Dr. Türeci’s father, a surgeon, came to Germany around the same time to work at a Catholic hospital in the small town of Lastrup, where she grew up inspired by the nuns who tended to her father’s patients. After considering becoming a nun herself, she followed in her father’s footsteps. Dr. Sahin and Dr. Türeci said their frustration as young physicians about the dearth of options faced by cancer patients for whom chemotherapy was no longer working had been the driving force behind their mRNA work. When the two met at Homburg university hospital in the 1990s, “We realized that with standard therapy we would quickly come to a point where we didn’t have anything to offer to patients,” Dr. Türeci said. “It was a formative experience.”
The couple wrote their doctoral dissertations on experimental therapies. Christoph Huber, then head of the hematology and oncology department of the Johannes‐Gutenberg University in Mainz and now a BioNTech nonexecutive director, persuaded them to join his faculty. There they began researching new treatments based on programming the body’s own immune system to defeat cancer like an infectious disease. In 2001, the couple set up their first company, Ganymed Pharmaceuticals GmbH, to develop an antibody treatment. Dr. Türeci was chief executive and Dr. Sahin was in charge of research. “The motivation…was to bridge the gap from science to survival: In our research we saw solutions that we couldn’t bring to our patients’ hospital beds,” Dr. Türeci said. One day in 2002, Dr. Sahin and Dr. Türeci left their laboratory around lunchtime and headed to the registry office, where they got married before donning back their lab coats and returning to work.
Özlem Türeci and Ugur Sahin founded BioNTech in 2008 to expand their research from antibody treatments into mRNA.
The earliest and most important backers of the couple were Andreas and Thomas Strüngmann, twin brothers and billionaire investors who have poured more than 200 million euros, equivalent to $241 million, in the couple’s enterprises since 2001. “Ugur is the visionary who shows us the future, and Özlem then tells us how to get there,” said Helmut Jeggle, BioNTech supervisory board chairman and manager of the Strüngmann family office. The brothers, he said, were happy to give the two scientists broad strategic leeway. In 2008, Drs. Sahin and Türeci founded BioNTech to expand their research from antibody treatments into mRNA. Since Ganymed was sold for $1.4 billion in 2016 and the couple reinvested the proceeds into their new venture, BioNTech has been their sole focus. All executive directors at BioNTech are scientists, including the finance and sales chiefs. The CEO retains his professorship at the local university, where he trains Ph.D. candidates, sometimes with an eye on recruitment. When talking about his work, Dr. Sahin, who wears a Turkish amulet known as a nazar around his neck, often reaches for the blackboard to sketch formulas.
The BioNTech team, half of them women, includes scientists with 60 nationalities, including authorities in the mRNA field such as Katalin Kariko, a biochemistry professor at the University of Pennsylvania Medical School. “Most biotech CEOs are salesmen, but Ugur is a scientist who convinced me because the science is good here,” said Prof. Kariko, who is Hungarian. “There is no blueprint for our products, no one has ever done it before.” On Jan. 25, a Saturday, after reading a study he said convinced him that the obscure disease in China would soon engulf the globe, Dr. Sahin set to work on his computer, designing the template for 10 possible coronavirus vaccines, one of which would become BNT162b2, the vaccine authorized in the U.K. on Wednesday.
Later that day, he told Mr. Jeggle that BioNTech would refocus its work on combating a virus that didn’t yet have a name and hadn’t yet been diagnosed in Europe. “I was surprised, to say the least,” said Mr. Jeggle, who has been working with Dr. Sahin since 2001. “We didn’t have much free capital, and we were tied up with our cancer research.” Dr. Sahin cited the Hong Kong flu of 1968-69 that claimed as many as four million lives. After two hours, Mr. Jeggle conceded. The following Monday, Dr. Sahin reorganized his staff into seven-day shifts, asked key workers to cancel their holidays and stop using public transport. Lightspeed Project, as he dubbed the effort, would develop a vaccine in months rather than years, as had so far been the case. In February, Dr. Sahin was observing the effect of the jab in a microscope. He took a selfie with two employees present. “I think this is the birth of our vaccine candidate,” he declared.
"We are incredibly proud to have such researchers in our country," said Angela Merkel in a digital meeting with #BioNTech founders Ugur Sahin and Özlem Türeci.
— DW Politics (@dw_politics) December 19, 2020
BioNTech had been working with Pfizer to develop a flu vaccine based on the mRNA technology. So when Dr. Sahin needed a partner to organize clinical trials across continents, manufacture the product globally and help distribute it in the U.S. and Europe, he knew whom to turn to. In March, the two companies signed a cooperation deal, and in April, the first human trials began. Later, BioNTech acquired a U.S. company and a large pharmaceutical factory in Germany to scale up production pending authorization—a high-risk approach should the shot fail. Morgan Stanley estimated that the vaccine could bring Pfizer and BioNTech more than $13 billion in revenue. Any proceeds will be reinvested, Dr. Sahin said.
Give this woman a Nobel Prize.https://t.co/KQrjyvI2ez
UPenn "told me that they’d had a meeting and concluded that I was not of faculty quality,” she said. ”When I told them I was leaving, they laughed at me and said, ‘BioNTech doesn’t even have a website.’”
— Richard Dawkins (@RichardDawkins) December 26, 2020
His main focus hasn’t changed: to bring mRNA-based and other innovative cancer treatments, 11 of which are in clinical trials, to market. Many scientists are still skeptical this can be done. Thomas C. Roberts, a senior postdoctoral scientist specializing in mRNA from the University of Oxford, said the vaccine results were exciting but the application of mRNA beyond the jab would face key challenges. Back in Mainz, Dr. Sahin disagrees, saying the vaccine’s authorization would validate his technology and “usher in a whole new category of medicines.”
Doctors in Norway have been told to conduct more thorough evaluations of very frail elderly patients in line to receive the Pfizer BioNTec vaccine against #COVID19, following the deaths of 23 patients shortly after receiving the vaccine https://t.co/UK5mD1YLfk
— The BMJ (@bmj_latest) January 15, 2021
REPROGRAMMED STEM CELLS